circAtlas 2.0 An integrated resource of circRNAs in vertebrates.

Links

Download data
Species Assembly Download
HumanGRCh37/hg19
  human_circRNA.bed.zip
MacacaBCM Mmul_8.0.1/rheMac8
  macaca_circRNA.bed.zip
MouseGRCm38/mm10
  mouse_circRNA.bed.zip
RatRGSC 6.0/rn6
  rat_circRNA.bed.zip
PigSGSC Sscrofa11.1/susScr11
  pig_circRNA.bed.zip
ChickenICGSC Gallus_gallus-4.0/galGal4
  chicken_circRNA.bed.zip
DogBroad CanFam3.1/canFam3
  dog_circRNA.bed.zip
circRNA software
Tools Title Links Versions PMID
CIRI2CIRI: an efficient and unbiased algorithm for de novo circular RNA identification.
  CIRI_v2.0.6.zip
v2.0.625583365
CIRI-ASComprehensive identification of internal structure and alternative splicing events in circular RNAs.
  CIRI_AS_v1.2.zip
v1.227350239
CIRI-fullReconstruction of full-length circular RNAs enables isoform-level quantification.
  CIRI_full_v2.0.zip
v2.030660194
Related Database
Database Keywords
GTRD  ChIP-seq data to identify transcription factor binding sites.
miRBase  Published miRNA sequences and annotation.